Detection of Carbapenemase Producers and Inhibitory Activity of Pediococcus pentosaceus YTPP 02 against Carbapenemase-Producing Bacteria

Authors

  • Yothin Teethaisong Department of Medical Sciences, Faculty of Allied Health Sciences, Burapha University, Chon Buri, 20131, Thailand
  • Kittipot Sirichaiwetchakoon School of Preclinical Sciences, Institute of Science, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand
  • Peerapat Krittanan Department of Medical Sciences, Faculty of Allied Health Sciences, Burapha University, Chon Buri, 20131, Thailand
  • Pimnipa Pornjirawittayakul Department of Medical Sciences, Faculty of Allied Health Sciences, Burapha University, Chon Buri, 20131, Thailand
  • Srichanok Nusuwan Department of Medical Technology, Chon Buri Hospital, Chon Buri 20130, Thailand
  • Benjawan Dunkhunthod Thai Traditional Medicine Program, Faculty of Nursing and Allied Health Sciences, Phetchaburi Rajabhat University, Phetchaburi 76000, Thailand
  • Paphatchaya Sookjumrus Department of Medical Technology, Chon Buri Hospital, Chon Buri 20130, Thailand
  • Ismini Nakouti Centre for Natural Products Discovery, School of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool L3 3AF, United Kingdom
  • Glyn Hobbs Centre for Natural Products Discovery, School of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool L3 3AF, United Kingdom
  • Griangsak Eumkeb School of Preclinical Sciences, Institute of Science, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand

DOI:

https://doi.org/10.48048/tis.2024.8766

Keywords:

Novel detection, Nitro-beta test, Combined dice, Antibacterial activity, Pediococcus pentosaceus, Carbapenemase producer, Acinetobacter baumannii, Klebsiella pneumoniae

Abstract

Carbapenem resistance caused by carbapenemase enzymes is of serious public health concerns globally, resulting in limited options for effective treatment. Rapid detection and exploring new agents are urgently required. This study aims to detect carbapenemase producers and to investigate the antibacterial potential of Pediococcus pentosaceus YTPP 02 against carbapenemase-producing Acinetobacter baumannii and Klebsiella pneumoniae. The carbapenemase producers were detected by a Nitro-beta test (NBT), a novel and rapid method, as well as by a combined disc with resazurin assay (CRA), and multiplex PCR. P. pentosaceus was isolated from pickled white radish on the MRS agar + 1 % CaCO3. The 16s rDNA-based PCR and sequencing were used for species identification. The agar overlay assay, agar well technique, minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) were employed to determine antibacterial activity of P. pentosaceus. The NBT successfully detected carbapenemase in all 5 clinical isolates within 20 min, and they all were positive for metallo-β-lactamases in CRA techniques within 7 h. The multiplex PCR detected VIM in A.  baumannii BUU 62715, co-presence of NDM and OXA-48 like genes in both K.  pneumoniae strains and NDM in A. baumannii BUU 60056 and 30899. Both A. baumannii and K. pneumoniae isolates were resistant to carbapenems. The 16s rDNA sequencing indicated P. pentosaceus. This bacterium exhibited Gram-positive cocci in pairs and quadruplets. P. pentosaceus YTPP 02 showed antibacterial activity against A. baumannii BUU 62715 and K.  pneumoniae BUU 10624, with an inhibition diameter of 19 mm. The cell-free supernatant demonstrated promising antibacterial activity against A. baumannii isolates, with inhibition zones ranging from 15.3 - 18.5 mm, and a MIC of 62.5 mg/mL. P. pentosaceus YTPP 02 showed promising antibacterial activity against carbapenemase-producing bacteria. This could be a good candidate for further study and development as a new agent for carbapenem-resistant bacteria.

HIGHLIGHTS

  • A Nitro-beta test was able to detect carbapenemase producers within 20 min.
  • A combined disc with a resazurin chromogenic agar plate identified metallo-β-lactamases within 7 h.
  • Multiplex PCR confirmed the presence of carbapenemase-encoding genes in clinical isolates.
  • pentosaceus inhibited the growth of carbapenemase-producing A. baumannii and K. pneumoniae.

GRAPHICAL ABSTRACT

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References

T Karampatakis, K Tsergouli and P Behzadi. Carbapenem-resistant Klebsiella pneumoniae: Virulence factors, molecular epidemiology and latest updates in treatment options. Antibiotics 2023; 12(2), 234.

Y Teethaisong, G Hobbs, I Nakouti, K Evans and G Eumkeb. A nitrocefin disc supplemented with ertapenem for rapid screening of carbapenemase-producing Enterobacteriaceae. Diagnostic Microbiology and Infectious Disease 2018; 91(1), 85-88.

C Aurilio, P Sansone, M Barbarisi, V Pota, LG Giaccari, F Coppolino, A Barbarisi, MB Passavanti and MC Pace. Mechanisms of action of carbapenem resistance. Antibiotics 2022; 11(3), 421.

D Pandey, N Singhal and M Kumar. β-LacFamPred: An online tool for prediction and classification of β-lactamase class, subclass, and family. Frontiers in Microbiology 2022; 13, 1039687.

M Peng, R Han, Y Guo, Y Zheng, F Yang, X Xu and F Hu. In vitro combined inhibitory activities of β-actam antibiotics and clavulanic acid against bla(KPC-2)-positive Klebsiella pneumoniae. Infection and Drug Resistance 2021; 14, 361-368.

N Wade, K Tehrani, NC Brüchle, MJ van Haren, V Mashayekhi and NI Martin. Mechanistic investigations of metallo-β-lactamase inhibitors: Strong zinc binding is not required for potent enzyme inhibition. ChemMedChem 2021; 16(10), 1651-1659.

M Sadeghi, A Mojtahedi, I Nikokar and ZA Roushan. The emergence of plasmid-encoded oxacillinase and carbapenemase among uropathogenic Escherichia coli (UPEC) isolated from hospitalized patients in the North of Iran. Heliyon 2023; 9(4), e15386.

Y Teethaisong, G Eumkeb, S Chumnarnsilpa, N Autarkool, J Hobson, I Nakouti, G Hobbs and K Evans. Phenotypic detection of AmpC β-lactamases, extended-spectrum β-lactamases and metallo-β-lactamases in Enterobacteriaceae using a resazurin microtitre assay with inhibitor-based methods. Journal of Medical Microbiology 2016; 65(10), 1079-1087.

SA Ibrahim, RD Ayivi, T Zimmerman, SA Siddiqui, AB Altemimi, H Fidan, T Esatbeyoglu and RV Bakhshayesh. Lactic acid bacteria as antimicrobial agents: Food safety and microbial food spoilage prevention. Foods 2021; 10(12), 3131.

W Setiyadi Putranto, J Gumilar, E Wulandari, A Pratama and J Mamangkey. Production of antimicrobial and bioactive peptides from bakasam using Enterococcus faecium 1.15 as a starter. International Journal of Science, Technology and Management 2023; 4, 1718-1724.

LD Vuyst and F Leroy. Bacteriocins from lactic acid bacteria: Production, purification, and food applications. Journal of Molecular Microbiology and Biotechnology 2007; 13(4), 194-199.

JP Osborne. 6 - Advances in microbiological quality control. In: AG Reynolds (Ed.). Managing wine quality. 2nd ed. Woodhead Publishing, Cambridgeshire, 2022, p. 207-241.

Y Qi, L Huang, Y Zeng, W Li, D Zhou, J Xie, J Xie, Q Tu, D Deng and J Yin. Pediococcus pentosaceus: Screening and application as probiotics in food processing. Frontiers in Microbiology 2021; 12, 762467.

L Gong, H He, D Li, L Cao, TA Khan, Y Li, L Pan, L Yan, X Ding, Y Sun, Y Zhang, G Yi, S Hu and L Xia. A new isolate of Pediococcus pentosaceus (SL001) with antibacterial activity against fish pathogens and potency in facilitating the immunity and growth performance of grass carps. Frontiers in Microbiology 2019; 10, 1384.

Y Teethaisong, I Nakouti, K Evans, G Eumkeb and G Hobbs. Nitro-Carba test, a novel and simple chromogenic phenotypic method for rapid screening of carbapenemase-producing Enterobacteriaceae. Journal of Global Antimicrobial Resistance 2019; 18, 22-25.

Y Teethaisong, G Eumke, I Nakouti, K Evans and G Hobbs. A combined disc method with resazurin agar plate assay for early phenotypic screening of KPC, MBL and OXA-48 carbapenemases among Enterobacteriaceae. Journal of Applied Microbiology 2016; 121(2), 408-414.

C Dallenne, AD Costa, D Decre, C Favier and G Arlet. Development of a set of multiplex PCR assays for the detection of genes encoding important beta-lactamases in Enterobacteriaceae. Journal of Antimicrobial Chemotherapy 2010; 65(3), 490-495.

M Kaase, F Szabados, L Wassill and SG Gatermann. Detection of carbapenemases in Enterobacteriaceae by a commercial multiplex PCR. Journal of Clinical Microbiology 2012; 50, 3115-8.

P Xiao, Y Huang, W Yang, B Zhang and X Quan. Screening lactic acid bacteria with high yielding-acid capacity from pickled tea for their potential uses of inoculating to ferment tea products. Journal of Food Science and Technology 2015; 52, 6727-34.

A Yelnetty, Purwadi and TE Tallei. Indigenous lactic acid bacteria isolated from spontaneously fermented goat milk as potential probiotics. Pak. Journal of Biological Science 2020; 23, 883-90.

A Zhang, X Wang, X Liang, C Zhou, Q Wang, J Zhang and H Wang. Performance evaluation of diagnostic assays for detection and classification of carbapenemase-producing organisms. Antibiotics 2021; 10, 1475.

P Nordmann. Carbapenemase-producing Enterobacteriaceae: Overview of a major public health challenge. Médecine et Maladies Infectieuses 2014; 44(2), 51-56.

SJ Yang, KT Kim, TY Kim and HD Paik. Probiotic properties and antioxidant activities of Pediococcus pentosaceus SC28 and Levilactobacillus brevis KU15151 in fermented black gamju. Foods 2020; 9(9), 1154.

S Jiang, L Cai, L Lv and L Li. Pediococcus pentosaceus, a future additive or probiotic candidate. Microbial Cell Factories 2021; 20, 45.

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Published

2024-11-10

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