Enhanced Gene Expression in the Biosynthetic Pathway of 2-Acetyl-1-pyrroline in “Hom Bon” Fragrant Native Rice in Response to Varied Light Wavelength Conditions

Authors

  • Sompong Siangdee Program in Creative Innovation in Science and Technology, Faculty of Science and Technology, Nakhon Si Thammarat Rajabhat University, Nakhon Si Thammarat 80280, Thailand
  • Sakrapee Khunpetch Department of Electrical Engineering, Faculty of Industrial Technology, Nakhon Si Thammarat Rajabhat University, Nakhon Si Thammarat 80280, Thailand
  • Suppawan Promprao Specialized Research Unit on Insects and Herbs, Nakhon Si Thammarat Rajabhat University, Nakhon Si Thammarat 80280, Thailand
  • Siriluk Sintupachee Program in Creative Innovation in Science and Technology, Faculty of Science and Technology, Nakhon Si Thammarat Rajabhat University, Nakhon Si Thammarat 80280, Thailand https://orcid.org/0000-0003-1174-0541

DOI:

https://doi.org/10.48048/tis.2024.7879

Keywords:

2-AP, Automatic cabinet, Intensity, Model, RNA expression, Validation, Wavelength

Abstract

The development of the Automated Agricultural Cabinet (AAC) prototype was driven by the goal of improving the aromatic qualities of locally grown rice. This compact prototype, designed with attention, employed Arduino programming to investigate genes related to the production of aromatic compounds in rice seedlings under different light conditions, including red, blue and white light. To ensure the reliability of experiments, a controlled environment was maintained at 25 °C and 75 % humidity, and rigorous testing confirmed precise light intensity measurements within the AAC. Results indicated specific light values: 9.25 ± 0.602 for red light, 11.47 ± 0.055 for blue light and 0.91 ± 0.027 µmol·m²·s¹ for white light. The study focused on up-regulated genes in 7-day-old ‘Hom Bon’ rice seedlings, revealing a significant increase in P5CS and 1Δ-pyrroline gene expression. These genes are crucial in the biosynthesis pathway of 2-acetyl-1-pyrroline (2-AP), with P5CS acting as a precursor and 1Δ-pyrroline as the final step. Interestingly, the study discovered that when 7-day-old ‘Hom Bon’ rice seedlings were exposed to both red and blue light, gene expression rose dramatically, contrasting when exposed to white light. This finding demonstrates that the wavelength of light exposure influences gene expression in the 2-acetyl-1-pyrroline (2-AP) biosynthetic pathway of ‘Hom Bon’ rice seedlings throughout the 7-day growth stage. This study demonstrates the feasibility of improving the smell of indigenous rice varieties by changing pre-planting light conditions, giving a promising avenue for increased commercial appeal. Furthermore, this project aims to improve the local community’s financial well-being by supporting better farming methods.

HIGHLIGHTS

  • The Automated Agricultural Cabinet (AAC) prototype has the capability to select the optimal light wavelength, inducing the up-regulation of genes associated with the 2-AP biosynthetic pathway in “Hom Bon” a fragrant native rice variety
  • In the fragrant native rice variety “Hom Bon” the up-regulated gene in the direct 2-AP pathway, P5CS, exhibited an expression level that was twice as high as that of the housekeeping gene
  • The red and blue wavelengths directly elevated the expression of up-regulated genes associated with the 2-AP biosynthetic pathway

GRAPHICAL ABSTRACT

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References

PR Ehrlich. Why no mention of overpopulation in talk of food systems? Nature 2021; 598, 257.

D Lee and K Kim. National investment framework for revitalizing the R&D collaborative ecosystem of sustainable smart agriculture. Sustainability 2022; 14, 6452.

MM Hasan, T Bashir, R Ghosh, SK Lee and H Bae. An overview of LEDs’ effects on the production of bioactive compounds and crop quality. Molecules 2017; 22, 1420.

Y Liu, D Li, H Li, X Jiang, Y Zhu, W Cao and J Ni. Design of a phenotypic sensor about protein and moisture in wheat grain. Front. Plant Sci. 2022; 13, 881560.

J Zhu, X Jin, S Li, Y Han and W Zheng. Prediction of soil available boron content in visible-near-infrared hyperspectral based on different preprocessing transformations and characteristic wavelengths modeling. Comput. Intell. Neurosci. 2022; 2022, 1-16.

M Erb and DJ Kliebenstein. Plant secondary metabolites as defenses, regulators, and primary metabolites: The blurred functional trichotomy. Plant Physiol. 2020; 184, 39-52.

S Zhang, L Zhang, H Zou, L Qiu, Y Zheng, D Yang and Y Wang. Effects of light on secondary metabolite biosynthesis in medicinal plants. Front. Plant Sci. 2021; 12, 781236.

Y Li, D Kong, Y Fu, MR Sussman and H Wu. The effect of developmental and environmental factors on secondary metabolites in medicinal plants. Plant Physiol. Biochem. 2020; 148, 80-9.

F Thoma, A Somborn-Schulz, D Schlehuber, V Keuter and G Deerberg. Effects of light on secondary metabolites in selected leafy greens: A review. Front. Plant Sci. 2020; 11, 497.

WS Jung, IM Chung, MH Hwang, SH Kim, CY Yu and BK Ghimire. Application of light-emitting diodes for improving the nutritional quality and bioactive compound levels of some crops and medicinal plants. Molecules 2021; 26, 1477.

M Hornyák, M Dziurka, M Kula-Maximenko, J Pastuszak, A Szczerba, M Szklarczyk and A Płażek. Photosynthetic efficiency, growth and secondary metabolism of common buckwheat (Fagopyrum esculentum Moench) in different controlled-environment production systems. Sci. Rep. 2022; 12, 257.

K Siatkowska, M Chraniuk, P Bollin and R Banasiuk. Light emitting diodes optimisation for secondary metabolites production by Droseraceae plants. J. Photochem. Photobiol. B Biol. 2021; 224, 112308.

FI Abdulsalam, S Yimthiang, A La-Up, P Ditthakit, P Cheewinsiriwat and W Jawjit. Association between climate variables and dengue incidence in Nakhon Si Thammarat Province, Thailand. Geospatial Health 2021; 16, 1012.

K Chinachanta, A Shutsrirung, L Herrmann, D Lesueur and W Pathom-Aree. Enhancement of the aroma compound 2-acetyl-1-pyrroline in Thai jasmine rice (Oryza sativa) by rhizobacteria under salt stress. Biology 2021; 10, 1065.

A Gaur, HS Wani, D Pandita, N Bharti, A Malav, A Shikari and A Bhat. Understanding the fragrance in rice. Rice Res. 2016; 4, 1000e125.

JM Hill. The inactivation of pea-seedling diamine oxidase by peroxidase and 1,5-diaminopentane. Biochem. J. 1967; 104, 1048.

VD Daygon, M Calingacion, LC Forster, JJ de Voss, BD Schwartz, B Ovenden, DE Alonso, SR McCouch, MJ Garson and MA Fitzgerald. Metabolomics and genomics combine to unravel the pathway for the presence of fragrance in rice. Sci. Rep. 2017; 7, 8767.

VR Hinge, HB Patil and AB Nadaf. Aroma volatile analyses and 2AP characterization at various developmental stages in Basmati and Non-Basmati scented rice (Oryza sativa L.) cultivars. Rice 2016; 9, 38.

M Imran, S Shafiq, S Ilahi, A Ghahramani, G Bao, ES Dessoky, E Widemann, S Pan, Z Mo and X Tang. Post-transcriptional regulation of 2-acetyl-1-pyrroline (2-AP) biosynthesis pathway, silicon, and heavy metal transporters in response to Zn in fragrant rice. Front. Plant Sci. 2022; 13, 948884.

K Spaninks, J van Lieshout, W van Ieperen and R Offringa. Regulation of early plant development by red and blue light: A comparative analysis between Arabidopsis thaliana and Solanum lycopersicum. Front. Plant Sci. 2020; 11, 599982.

G Li, X Yao, Z Chen, X Tian and L Lu. The overexpression of Oryza sativa L. CYP85A1 promotes growth and biomass production in transgenic trees. Int. J. Mol. Sci. 2023; 24, 6480.

S Matsuo, K Nanya, S Imanishi, I Honda and E Goto. Effects of blue and red lights on gibberellin metabolism in tomato seedlings. Horticulture J. 2019; 88, 76-82.

X Fan, F Xue, B Song, L Chen, G Xu and H Xu. Effects of blue and red light on growth and nitrate metabolism in Pakchoi. Open Chem. 2019; 17, 456-64.

A Kume, T Akitsu and KN Nasahara. Why is chlorophyll b only used in light-harvesting systems? J. Plant Res. 2018; 131, 961-72.

D Toldi, M Gyugos, É Darkó, G Szalai, Z Gulyás, K Gierczik, A Székely, Á Boldizsár, G Galiba, M Müller, L Simon-Sarkadi and G Kocsy. Light intensity and spectrum affect metabolism of glutathione and amino acids at transcriptional level. PLoS One 2019; 14, e0227271.

O Sytar, M Zivcak, S Neugart, PM Toutounchi and M Brestic. Precultivation of young seedlings under different color shades modifies the accumulation of phenolic compounds in Cichorium leaves in later growth phases. Environ. Exp. Bot. 2019; 165, 30-8.

M Nazir, MA Ullah, M Younas, A Siddiquah, M Shah, N Giglioli-Guivarc’h, C Hano and BH Abbasi. Light-mediated biosynthesis of phenylpropanoid metabolites and antioxidant potential in callus cultures of purple basil (Ocimum basilicum L. var purpurascens). Plant Cell Tissue Organ Cult. 2020; 142, 107-20.

I Weremczuk-Jezyna, K Hnatuszko-Konka, L Lebelt and I Grzegorczyk-Karolak. The protective function and modification of secondary metabolite accumulation in response to light stress in Dracocephalum forrestii shoots. Int. J. Mol. Sci. 2021; 22, 7965.

AA de Carvalho, SKV Bertolucci, AD Honorato, TT Rocha, ST Silva and J Pinto. Influence of light spectra and elicitors on growth and ascaridole content using in vitro cultures of Dysphania ambrosioides L. Plant Cell Tissue Organ Cult. 2020; 143, 277-90.

Z Ghaffari, M Rahimmalek and MR Sabzalian. Variation in the primary and secondary metabolites derived from the isoprenoid pathway in the Perovskia species in response to different wavelengths generated by light emitting diodes (LEDs). Ind. Crop. Prod. 2019; 140, 111592.

TCY Kuo, CH Chen, SH Chen, IH Lu, MJ Chu, LC Huang, CY Lin, CY Chen, HF Lo, ST Jeng and LFO Chen. The effect of red light and far-red light conditions on secondary metabolism in Agarwood. BMC Plant Biol. 2015; 15, 139.

Y Liu, L Song, W Yu, Y Hu, X Ma, J Wu and Y Ying. Light quality modifies camptothecin production and gene expression of biosynthesis in Camptotheca acuminata Decne seedlings. Ind. Crop. Prod. 2015; 66, 137-43.

KK Ohashi, T Fukuyama, A Nakai, H Usami, E Ono and H Watanabe. Growth and alkaloids production in Madagascar periwinkle plants grown under red LED. IFAC Proc. Vol. 2013; 46, 274-7.

HN Matsuura, V Fragoso, JT Paranhos, MR Rau and AG Fett-Neto. The bioactive monoterpene indole alkaloid N,β-D-glucopyranosyl vincosamide is regulated by irradiance quality and development in Psychotria leiocarpa. Ind. Crop. Prod. 2016; 86, 210-8.

H Luo, T Zhang, A Zheng, L He, R Lai, J Liu, P Xing and X Tang. Exogenous proline induces regulation in 2-acetyl-1-pyrroline (2-AP) biosynthesis and quality characters in fragrant rice (Oryza sativa L.). Sci. Rep. 2020; 10, 13971.

G Bao, S Huang, U Ashraf, J Qiao, A Zheng, Q Zhou, L Li and X Wan. Insights of improved aroma under additional nitrogen application at booting stage in fragrant rice. Genes 2022; 13, 2092.

P Du, H Luo, J He, T Mao, B Du and L Hu. Different tillage induces regulation in 2-acetyl-1-pyrroline biosynthesis in direct-seeded fragrant rice. BMC Plant Biol. 2019; 19, 308.

J Shuochen, Z Lihe, H Fenqin, T Xiangru and D Bi. Zinc supplementation and light intensity affect 2-acetyl-1-pyrroline (2AP) formation in fragrant rice. BMC Plant Biol. 2023; 23, 194.

H Xie, W Xie, S Pan, X Liu, H Tian, M Duan, S Wang, X Tang and Z Mo. Effects of light quality treatments during the grain filling period on yield, quality, and fragrance in fragrant rice. Agronomy 2021; 11, 531.

NE Okpala, Z Mo, M Duan and X Tang. The genetics and biosynthesis of 2-acetyl-1-pyrroline in fragrant rice. Plant Physiol. Biochem. 2019; 135, 272-6.

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Published

2024-06-10

How to Cite

Siangdee, S., Khunpetch, S., Promprao, S., & Sintupachee, S. (2024). Enhanced Gene Expression in the Biosynthetic Pathway of 2-Acetyl-1-pyrroline in “Hom Bon” Fragrant Native Rice in Response to Varied Light Wavelength Conditions . Trends in Sciences, 21(8), 7879. https://doi.org/10.48048/tis.2024.7879